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Genomic Sequence Tags

Documents
16S Singular Point GST Protocol (Text)
GST manuscript (PDF) (revised 13 Sep 2002)
GST and Long SAGE protocols (PDF)
Data Analysis for Yp Pilot Project (PDF)

Yp Pilot Project Results
Sample GSTs, clustered, unambiguous polarities.
Sample GSTs, clustered, ambiguous polarities
Sample GSTs which exactly match published Yp genome (unambigous polarity)
Sample GSTs which exactly match published Yp genome (ambigous polarity)
Smith-Waterman matches to Yp genome GSTs.
Sample GSTs which only match internal GSTs in the genome.
A breakdown of hit and missed tags, viewed by BamHI fragment.


Poster presentation at O'Reilly Biocon 2003: PDF, PS      (Note: these are best displayed in E-format paper. The same poster is sectioned up for US letter-size here)

Software

Contacts:
Sean R. McCorkle mccorkle@bnl.gov
John Dunn jdunn@bnl.gov
Daniel van der Lelie vdlelied@bnl.gov

Last updated 12:36 pm, Apr 22, 2004
Maintained by Sean R. McCorkle (mccorkle@bnl.gov).

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